Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015929195.1_cds_XP_016476575.1_68391
CDS Infomation

[gene=LOC107798125] [db_xref=GeneID:107798125] [protein=histone deacetylase HDT1-like isoform X2] [protein_id=XP_016476575.1] [location=complement(join(27011..27074,27145..27271,27547..27637,27728..27778,28459..28574,28697..28735,28814..28839,28958..29175,29279..29349,30380..30392))] [gbkey=CDS]
Sequence

ATGGAATTCTGGGGTGCTGAGGTGAAAAGTGGACAACCTTTAACTGTTCAACCTGGAGAT
GATATGGTTTTGCATCTTTCACAGGCATCTCTTGGTGAAGCAAAAAAGGATAAAGGATCG
GAACCTGTATGCTTGTCTGTGAATGTTGATGGAAAGAAACTTGTTCTTGGAACACTCAAC
TTAGATAAGCTGCCTCAACAACAATTTGACCTGGTTTTTGATAGAGACTTTGAACTATCA
CACAACTGGAAAAATGGTAGTGTCTACTTCTTCGGATACAAGGCAGCTAACCCATACGAG
CAGGAGGACGATGAAGAAGATGAAGATGAGTCTGATGAGGAAATACCCCTTACTCTTGCC
AACATTGGTAAGCAGAAGGTGAAGATTGCAGAACCTAGTAAAGATGCAAAGGCGGATGAT
GAAGATGATAGCAGTGATGAAGATGATACGTCTGAGGATGAAGAAGATTCTGAGATGGGG
GAGGATGAAGATGATAGTGATGAAGATAAGTCTGATGAGGAGACACCAAAGAAGGCTGAG
CCTAGCAAAAAGCGACCTGCAGATTCAGCAACAAAAACTCCTGCACCCGATAAAAAGGCA
AAATTTGCAACACCTCAAAAGGCTGATGGTAAGAAAGGTGCTGTCCATGTGGCAACGCCT
CACCCCTCAAAACAGGCCGGTAAGACTCCTGGAAACAAGTCAAACCAGACTCCAAAATCT
GGCGGAGCTCTTGCCTGCAAGACATGCAACAGGACTTTTGGTTCTGAAACTGCTCTAGAA
TCTCACTCAAAAGCTAAGCACAGTGCCGGGAAGTAA

Peptide Sequence

PEP ID

XP_016476575.1
PEP Infomation

PREDICTED: histone deacetylase HDT1-like isoform X2 [Nicotiana tabacum]
Sequence

MEFWGAEVKSGQPLTVQPGDDMVLHLSQASLGEAKKDKGSEPVCLSVNVDGKKLVLGTLN
LDKLPQQQFDLVFDRDFELSHNWKNGSVYFFGYKAANPYEQEDDEEDEDESDEEIPLTLA
NIGKQKVKIAEPSKDAKADDEDDSSDEDDTSEDEEDSEMGEDEDDSDEDKSDEETPKKAE
PSKKRPADSATKTPAPDKKAKFATPQKADGKKGAVHVATPHPSKQAGKTPGNKSNQTPKS
GGALACKTCNRTFGSETALESHSKAKHSAGK

Transcript Sequence

Gene sequence data has not been registered.